Gene Identification
The genes related to the stem cell pathway can be identified through this functional module. The results from 808 species are included in this module, accessible through the website. If the genome of the species of interest is unavailable, the corresponding results can be obtained by uploading the fasta file of the protein sequences.
Abies alba
Abrus precatorius
Acacia pycnantha
Acer catalpifolium
Acer negundo
Acer pseudosieboldianum
Acer saccharum
Acer truncatum
Acer yangbiense
Achnatherum splendens
Acorus americanus
Acorus tatarinowii
Actinidia chinensis
Actinidia eriantha
Adiantum capillus-veneris
Adiantum nelumboides
Aegiceras corniculatum
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aeschynomene evenia
Aethionema arabicum
Akebia trifoliata
Aldrovanda vesiculosa
Allium cepa
Allium sativum
Alsophila spinulosa
Alyssum linifolium
Amaranthus hybridus
Amaranthus hypochondriacus
Amaranthus palmeri
Amaranthus tricolor
Amborella trichopoda
Ammopiptanthus nanus
Amorphophallus konjac
Amphicarpaea edgeworthii
Anacardium occidentale
Ananas comosus
Andrographis paniculata
Angelica sinensis
Anthoceros agrestis
Anthoceros angustus
Anthoceros punctatus
Antirrhinum majus
Apium graveolens
Apostasia shenzhenica
Aquilaria sinensis
Aquilegia coerulea
Aquilegia oxysepala
Arabidopsis halleri
Arabidopsis lyrata
Arabidopsis suecica
Arabidopsis thaliana
Arabis alpina
Arachis duranensis
Arachis hypogaea
Arachis ipaensis
Arachis monticola
Aralia elata
Arctium lappa
Areca catechu
Aristolochia contorta
Aristolochia fimbriata
Artemisia annua
Artocarpus altilis
Artocarpus heterophyllus
Artocarpus nanchuanensis
Asparagus kiusianus
Asparagus officinalis
Asparagus setaceus
Asterochloris glomerata
Astrephomene gubernaculifera
Atalantia buxifolia
Atriplex hortensis
Auxenochlorella protothecoides
Avena atlantica
Avena eriantha
Avena insularis
Avena longiglumis
Avena sativa
Averrhoa carambola
Avicennia marina
Azadirachta indica
Azolla filiculoides
Bathycoccus prasinos
Bauhinia variegata
Begonia darthvaderiana
Begonia fuchsioides
Begonia loranthoides
Begonia masoniana
Begonia peltatifolia
Benincasa hispida
Beta patula
Beta vulgaris
Betula pendula
Betula platyphylla
Boea hygrometrica
Boechera stricta
Boehmeria nivea cv. Zhongsizhu 1
Boehmeria nivea var. tenacissima cv. Qingyezhuma
Bombax ceiba
Bonia amplexicaulis
Botryococcus braunii
Brachypodium distachyon
Brachypodium hybridum
Brachypodium mexicanum
Brachypodium stacei
Brachypodium sylvaticum
Brassica carinata
Brassica juncea
Brassica napus
Brassica nigra
Brassica oleracea
Brassica rapa
Bretschneidera sinensis
Bruguiera sexangula
Buddleja alternifolia
Buxus austroyunnanensis
Buxus sinica
Cajanus cajan
Cakile maritima
Calamus simplicifolius
Callicarpa americana
Calohypnum plumiforme
Calotropis gigantea
Camelina neglecta
Camelina sativa
Camellia chekiangoleosa
Camellia lanceoleosa
Camellia sinensis cv. DuyunMaojian
Camellia sinensis var. assamica
Camptotheca acuminata
Cannabis sativa
Capparis spinosa
Capsella grandiflora
Capsella rubella
Capsicum annuum
Capsicum baccatum
Capsicum chinense
Cardamine enshiensis
Cardamine hirsuta
Cardiospermum halicacabum
Carex cristatella
Carex littledalei
Carex scoparia
Carica papaya
Carpinus fangiana
Carpinus viminea
Carthamus tinctorius
Carya cathayensis
Carya illinoinensis
Castanea crenata
Castanea mollissima cv. Hei-Shan-Zhai-7
Castanea mollissima cv. N11-1
Castanea mollissima cv. Yan-Hong
Castanea mollissima cv. Yan-Shan-Zao-Sheng
Castanopsis tibetana
Casuarina equisetifolia
Casuarina glauca
Catharanthus roseus
Caulanthus amplexicaulis
Caulerpa lentillifera
Cenchrus americanus
Cenchrus purpureus
Cephalotus follicularis
Cerasus x kanzakura var. Atami-zakura
Cerasus x kanzakura var. Kawazu-zakura
Cerasus x yedoensis var. nudiflora
Cerasus x yedoensis var. Somei-Yoshino
Ceratodon purpureus
Ceratophyllum demersum
Ceratopteris richardii
Cercis canadensis
Cercis chinensis
Chamaecrista fasciculata
Chara braunii
Chasmanthium laxum
Chenopodium formosanum
Chenopodium pallidicaule
Chenopodium quinoa
Chimonanthus salicifolius
Chiococca alba
Chlamydomonas eustigma
Chlamydomonas incerta
Chlamydomonas reinhardtii
Chlamydomonas reinhardtii CC-4532C
Chlamydomonas schloesseri
Chloranthus sessilifolius
Chloranthus spicatus
Chlorella sorokiniana
Chlorella variabilis NC64A
Chlorella vulgaris
Chlorokybus atmophyticus-CCAC 0220
Chloropicon primus
Chondrus crispus
Chromochloris zofingiensis
Chrysanthemum nankingense
Chrysanthemum seticuspe
Cicer arietinum
Cicer echinospermum
Cicer reticulatum
Cichorium endivia
Cichorium intybus
Cinnamomum kanehirae
Citrullus lanatus
Citrus clementina
Citrus grandis
Citrus ichangensis
Citrus medica
Citrus reticulata
Citrus sinensis
Citrus unshiu
Cleistogenes songorica
Cleome violacea
Coccomyxa subellipsoidea
Cocos nucifera dwarf
Cocos nucifera tall
Coelastrum proboscideum
Coffea arabica
Coffea canephora
Coffea humblotiana
Colocasia esculenta
Conyza canadensis
Coptis chinensis
Corchorus capsularis
Corchorus olitorius
Coriandrum sativum
Corydalis tomentella
Corylus avellana
Corylus heterophylla
Corylus mandshurica
Corymbia citriodora
Crambe hispanica
Crataegus pinnatifida
Cremastra appendiculata
Cucumis hystrix
Cucumis melo
Cucumis sativus
Cucurbita argyrosperma
Cucurbita maxima
Cucurbita moschata
Cucurbita pepo
Cuscuta australis
Cuscuta campestris
Cyanidiococcus yangmingshanensis
Cyanidioschyzon merolae
Cyanophora paradoxa CCMP329
Cycas panzhihuaensis
Cyclocarya paliurus
Cymbidium ensifolium
Cynara cardunculus
Daemonorops jenkinsiana
Dalbergia odorifera
Datura stramonium
Daucus carota
Davidia involucrata
Dendrobium catenatum
Dendrobium chrysotoxum
Dendrobium huoshanense
Dendrobium nobile
Dendrobium officinale
Descurainia sophioides
Dianthus caryophyllus
Dichanthelium oligosanthes
Digitaria exilis
Dimocarpus longan
Dioscorea alata
Dioscorea rotundata
Diospyros lotus
Diospyros oleifera
Dipterocarpus turbinatus
Diptychocarpus strictus
Drosera spatulata
Dryas drummondii
Dunaliella salina
Durio zibethinus
Echinochloa colona
Echinochloa crus-galli
Echinochloa haploclada
Echinochloa oryzicola
Edaphochlamys debaryana
Elaeagnus angustifolia
Elaeis guineensis
Eleusine coracana
Ensete glaucum
Ensete ventricosum
Entada phaseoloides
Entodon seductrix
Epimedium pubescens
Eragrostis curvula
Eragrostis nindensis
Eragrostis tef
Erianthus fulvus
Erigeron breviscapus
Erigeron canadensis
Eriobotrya japonica
Eruca vesicaria
Erysimum cheiranthoides
Erythranthe guttata
Eucalyptus grandis
Euclidium syriacum
Euphorbia lathyris
Euphorbia peplus
Euryale ferox
Euscaphis japonica
Eustoma grandiflorum
Eutrema salsugineum
Fagopyrum esculentum
Fagopyrum tataricum
Fagus sylvatica
Faidherbia albida
Ficus carica
Ficus erecta
Ficus hispida
Ficus microcarpa
Fontinalis antipyretica
Fortunella hindsii
Fragaria daltoniana
Fragaria iinumae
Fragaria mandshurica
Fragaria nilgerrensis
Fragaria pentaphylla
Fragaria vesca
Fragaria viridis
Fragaria x ananassa
Fragaria orientalis
Fraxinus excelsior
Fraxinus pennsylvanica
Galdieria partita
Galdieria sulphuraria
Gardenia jasminoides
Gastrodia elata
Gelsemium elegans
Genlisea aurea
Gilia yorkii
Gillenia trifoliata
Ginkgo biloba
Glycine cyrtoloba
Glycine dolichocarpa
Glycine falcata
Glycine max
Glycine soja
Glycine stenophita
Glycine syndetika
Glycine tomentella sp.D3
Gnetum montanum
Gonium pectorale
Gossypioides kirkii
Gossypium anomalum
Gossypium arboreum
Gossypium aridum
Gossypium armourianum
Gossypium australe
Gossypium barbadense
Gossypium bickii
Gossypium darwinii
Gossypium davidsonii
Gossypium gossypioides
Gossypium harknessii
Gossypium herbaceum
Gossypium hirsutum
Gossypium klotzschianum
Gossypium laxum
Gossypium lobatum
Gossypium longicalyx
Gossypium mustelinum
Gossypium raimondii
Gossypium rotundifolium
Gossypium schwendimanii
Gossypium stocksii
Gossypium thurberi
Gossypium tomentosum
Gossypium trilobum
Gossypium turneri
Gracilaria domingensis
Guadua angustifolia
Gynandropsis gynandra
Gypsophila paniculata
Haloxylon ammodendron
Hamamelis virginiana
Handroanthus impetiginosus
Helianthus annuus
Herpetospermum pedunculosum
Hevea brasiliensis
Hibiscus cannabinus
Hippophae rhamnoides
Hirschfeldia incana
Hopea hainanensis
Hordeum marinum
Hordeum spontaneum EC_N1
Hordeum spontaneum EC_S1
Hordeum vulgare
Humulus lupulus
Hydrangea macrophylla
Hydrangea quercifolia
Hypnum curvifolium
Iberis amara
Ilex polyneura
Iochroma cyaneum
Ipomoea aquatica
Ipomoea cairica
Ipomoea nil
Ipomoea trifida
Ipomoea triloba
Isatis tinctoria
Isoetes taiwanensis
Jacaranda mimosifolia
Jasminum sambac cv. bifoliatum
Jasminum sambac cv. unifoliatum
Jatropha curcas
Juglans mandshurica
Juglans regia
Juglans sigillata
Juncus effusus
Juncus inflexus
Kalanchoe fedtschenkoi
Kalanchoe laxiflora
Kandelia obovata
Kingdonia uniflora
Klebsormidium nitens NIES-2285
Lablab purpureus
Lactuca sativa
Lagenaria siceraria
Lanxangia tsao-ko
Leavenworthia alabamica
Leersia perrieri
Lemna minor
Lepidium meyenii
Lepidium sativum
Lindenbergia philippensis
Linum usitatissimum
Liriodendron chinense
Litchi chinensis
Lithospermum erythrorhizon
Lobularia maritima
Lonicera japonica
Lotus japonicus
Luffa cylindrica
Lunaria annua
Lupinus albus
Lupinus angustifolius
Macadamia integrifolia
Macleaya cordata
Macrotyloma uniflorum
Magnolia biondii
Malania oleifera
Malcolmia maritima
Malus baccata
Malus domestica
Malus prunifolia
Malus sieversii
Malus sylvestris
Mangifera indica
Manihot esculenta
Marchantia polymorpha
Medicago polymorpha
Medicago sativa
Medicago truncatula
Megacarpaea delavayi
Megadenia pygmaea
Melastoma candidum
Melastoma dodecandrum
Melilotus albus
Mesostigma viride-CCAC 1140
Mesotaenium endlicherianum
Micractinium conductrix
Micromonas commoda
Micromonas pusilla
Microthlaspi erraticum
Mikania micrantha
Mimulus guttatus
Miscanthus lutarioriparius
Miscanthus sinensis
Monoraphidium minutum
Monoraphidium neglectum
Moringa oleifera
Morus notabilis
Mucuna pruriens
Musa acuminata
Musa balbisiana
Musa beccarii
Musa itinerans
Musa textilis
Musa troglodytarum
Musa schizocarpa
Myagrum perfoliatum
Mychonastes homosphaera
Myrica rubra
Nannochloris desiccata
Nelumbo Adans cv. Taikonglian No. 3
Nelumbo nucifera var. China Antique
Neolamarckia cadamba
Nephelium lappaceum
Nicotiana attenuata
Nicotiana benthamiana
Nicotiana tabacum
Nicotiana tomentosiformis
Nissolia schottii
Nymphaea colorata
Nymphaea thermarum
Nymphoides indica
Nyssa sinensis
Nyssa yunnanensis
Ocimum basilicum
Olea europaea
Olyra latifolia
Ophiorrhiza pumila
Origanum majorana
Origanum vulgare
Oropetium thomaeum
Orychophragmus violaceus
Oryza alta
Oryza barthii
Oryza brachyantha
Oryza glaberrima
Oryza glumaepatula
Oryza granulata
Oryza longistaminata
Oryza meridionalis
Oryza nivara
Oryza punctata
Oryza rufipogon
Oryza sativa subsp. Japonica
Oryza sativa subsp. Japonica var. Kitaake
Ostreococcus lucimarinus
Ostreococcus tauri
Paeonia ostii
Paeonia suffruticosa
Panax ginseng
Panax japonicus
Panax quinquefolius
Panax stipuleanatus
Panicum hallii
Panicum miliaceum
Panicum virgatum
Papaver rhoeas
Papaver setigerum
Papaver somniferum
Parasponia andersonii
Paspalum vaginatum
Passiflora edulis
Passiflora organensis
Paulownia fortunei
Pedinomonas minor
Penium margaritaceum
Perilla citriodora PC02
Perilla citriodora PC99
Perilla frutescens
Persea americana cv. Hass
Persea americana var. drymifolia
Petunia axillaris
Petunia inflata
Phalaenopsis equestris
Pharus latifolius
Phaseolus acutifolius
Phaseolus lunatus
Phaseolus vulgaris
Phoebe bournei
Phoenix dactylifera
Phragmites australis
Phtheirospermum japonicum
Phyllostachys edulis
Phyllostachys heterocycla
Physalis floridana
Physalis grisea
Physalis pruinosa
Physcomitrium patens
Picea abies
Picea engelmannii
Picea glauca
Picrorhiza kurrooa
Pinus tabuliformis
Pinus taeda
Piper nigrum
Pistacia vera
Pistia stratiotes
Pisum sativum
Pogostemon cablin
Pohlia nutans
Poncirus trifoliata
Populus alba
Populus alba x Populus tremula
Populus deltoides
Populus euphratica
Populus ilicifolia
Populus maximowiczii
Populus pruinosa
Populus simonii
Populus tomentosa
Populus tremula
Populus tremuloides
Populus trichocarpa
Populus wilsonii
Porphyra umbilicalis
Portulaca amilis
Potentilla micrantha
Prasinoderma coloniale
Primula veris
Prunus armeniaca cv. Stella
Prunus armeniaca Marouch n14
Prunus avium
Prunus campanulata
Prunus domestica
Prunus dulcis
Prunus mandshurica
Prunus mume
Prunus persica
Prunus salicina
Prunus sibirica
Puccinellia tenuiflora
Punica granatum
Puya raimondii
Pyrus betulifolia
Pyrus bretschneideri cv. Dangshansuli
Pyrus bretschneideri cv. Hongxiangsu
Pyrus communis
Pyrus pyrifolia cv. Cuiguan
Pyrus pyrifolia var. Nijisseiki
Pyrus ussuriensis x communis
Quercus acutissima
Quercus dentata
Quercus gilva
Quercus lobata
Quercus mongolica
Quercus robur
Quercus rubra
Quercus suber
Raddia distichophylla
Raddia guianensis
Raphanus raphanistrum
Raphanus sativus
Raphidocelis subcapitata
Rhodiola crenulata
Rhododendron delavayi
Rhododendron griersonianum
Rhododendron henanense
Rhododendron ovatum
Rhododendron ripense
Rhododendron simsii
Rhododendron williamsianum
Ricinus communis
Rorippa islandica
Rosa chinensis
Rosa multiflora
Rosa rugosa
Rosa wichuraiana
Rosmarinus officinalis
Rubus chingii
Rubus corchorifolius
Rubus occidentalis
Saccharum spontaneum
Saccharum x sp.
Salix arbutifolia
Salix brachista
Salix chaenomeloides
Salix dunnii
Salix purpurea
Salix suchowensis
Salvia bowleyana
Salvia miltiorrhiza
Salvia splendens
Salvinia cucullata
Sapindus mukorossi
Sapria himalayana
Scalesia atractyloides
Schrenkiella parvula
Sclerocarya birrea
Scutellaria baicalensis
Scutellaria barbata
Secale cereale
Sechium edule
Selaginella moellendorffii
Selenicereus undatus
Senna tora
Sequoia sempervirens
Sequoiadendron giganteum
Sesamum indicum
Setaria italica
Setaria viridis
Simmondsia chinensis
Sinapis alba
Sinapis arvensis
Sindora glabra
Siraitia grosvenorii
Sisymbrium irio
Smallanthus sonchifolius
Solanum aethiopicum
Solanum candolleanum
Solanum chacoense M6
Solanum chilense
Solanum lycopersicoides
Solanum lycopersicum
Solanum melongena
Solanum pennellii
Solanum pimpinellifolium
Solanum stenotomum
Solanum tuberosum
Solanum verrucosum
Sonneratia alba
Sonneratia caseolaris
Sorbus pohuashanensis
Sorghum bicolor
Spatholobus suberectus
Speranskia yunnanensis
Sphagnum fallax
Sphagnum magellanicum
Spinacia oleracea
Spirodela polyrhiza
Spirogloea muscicola
Sporobolus pyramidalis
Sporobolus stapfianus
Stanleya pinnata
Stellera chamaejasme
Stevia rebaudiana
Streptocarpus rexii
Streptochaeta angustifolia
Striga asiatica
Strobilanthes cusia
Suaeda aralocaspica
Suaeda glauca
Syringa oblata
Syzygium aromaticum
Syzygium grande
Taraxacum kok-saghyz
Taraxacum mongolicum
Tarenaya hassleriana
Taxus chinensis
Tectona grandis
Telopea speciosissima
Tetrabaena socialis
Tetracentron sinense
Tetrastigma voinierianum
Thalictrum thalictroides
Theobroma cacao
Thinopyrum elongatum
Thinopyrum intermedium
Thlaspi arvense
Thuja plicata
Thymus quinquecostatus
Toona ciliata
Toona sinensis
Trema orientalis
Trichopus zeylanicus
Trifolium pratense
Trifolium subterraneum
Tripterygium wilfordii
Triticum aestivum
Triticum dicoccoides
Triticum turgidum
Triticum urartu
Trochodendron aralioides
Ulva compressa
Ulva mutabilis
Urochloa fusca
Utricularia reniformis
Vaccinium corymbosum
Vaccinium darrowii
Vaccinium macrocarpon
Vaccinium oxycoccos
Vanilla planifolia
Vernicia fordii
Vicia faba cv. Hedin/2
Vicia faba cv. Tiffany
Vicia sativa
Vigna angularis
Vigna exilis
Vigna indica
Vigna marina
Vigna minima
Vigna mungo
Vigna radiata
Vigna riukiuensis
Vigna stipulacea
Vigna subterranea
Vigna trilobata
Vigna umbellata
Vigna unguiculata
Vigna vexillata
Vitellaria paradoxa
Vitis arizonica
Vitis riparia
Vitis rotundifolia
Vitis vinifera
Volvox africanus
Volvox carteri
Volvox reticuliferus NIES-3785
Volvox reticuliferus NIES-3786
Welwitschia mirabilis
Wolffia australiana strain 7733
Wolffia australiana strain 8730
Wurfbainia villosa
Xanthoceras sorbifolium
Zanthoxylum armatum
Zanthoxylum bungeanum
Zea mays B73
Zea mays NKH8431
Zingiber officinale
Zizania latifolia
Zizania palustris
Ziziphus jujuba
Zostera marina
Zostera muelleri
Zoysia japonica
Zoysia matrella
Zoysia pacifica
Gene:
ACR4
AG
AGL22
AGO1
AGO10
AHK2
AHK4
AHP6
AMP1
AP2
APL
APP1
AQC1
ARF10
ARF16
ARF19
ARF3
ARF4
ARF5
ARF7
ARR1
ARR10
ARR12
ARR15
ARR7
AS1
AS2
AtCDC5
AtCKX5
AtCKX6
ATHB8
AtLA1
AtMC4
AtMMS21
AtRING1a
AtRING1b
BAM1
BARD1
BEH3
BELLRINGER
BES1
BIB
BOP1
BOP2
BRI1
BRL1
BRL3
BRM
BRU1
CDF4
CDKB1;1
CDKB1;2
CHR12
CHR23
CIK1
CIK2
CIK3
CIK4
CIK5
CIK6
CLE1
CLE17
CLE19
CLE2
CLE3
CLE4
CLE40
CLE41
CLE44
CLE5
CLE6
CLE7
CLF
CLV1
CLV2
CLV3
CNA
COI1
COP1
CRN
CUC1
CUC2
CUC3
CYCD1;1
CYCD3;3
CYCD6;1
CYP78A5
CYP78A7
DRN
E2Fa
EIL2
EIL3
EIN3
EMB1611
ER
ERF109
ERF114
ERF115
ERL1
ERL2
FAF1
FAF2
FAF3
FAF4
FAS1
FAS2
FEZ
FIL
GCN5
GIF1
GIF2
GIF3
GSO1
GSO2
HAM1
HAM2
HAM3
HAM4
HAN
HCA2
HDA19
HDA9
HEC1
HEC2
HEC3
IAA17
IPT1
IPT3
IPT5
IPT7
JKD
JLO
KNAT1
KNAT2
KNAT6
KNU
KRP2
LBD16
LFY
LHP1
LOG4
LOG7
MDF
MOL1
MYB115
MYB3R1
MYB3R4
MYC2
OBE1
OBE2
OBE3
PAN
PGA37
PHB
PHB3
PHV
PID
PIN1
PIN3
PIN7
PLL1
PLT1
PLT2
PLT3
PNF
POL
PRL1
PRMT5
PSK5
PXC1
PXY
RAX1
RBR
RCN1
REV
RGF1
RGF2
RGF3
RopGEF7
RPK1
RUL1
SCL28
SCR
SCZ
SDG4
SEU
SHR
SHY2
SKIP
SMB
SMOS1
SOG1
SPT
STIP
STM
SUPERMAN
SYD
TCP20
TCP21
TCP3
TGA2
TGA5
TGA6
TOAD2
TOR
TSL
ULT1
WOX11
WOX12
WOX14
WOX3
WOX4
WOX5
WRKY23
WUS
YAB3
YAB5
YAK1
YUC1
YUC2
YUC4
YUC6
Blast E-value:
1e-5
1e-6
1e-7
1e-8
1e-9
1e-10
1e-20
Hmmsearch E-value:
1
0.1
0.01
0.001
0.0001
0.00001
0.000001
0.0000001
0.00000001
0.000000001
0.0000000001